STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hcgDHmd co-occurring protein HcgD; Belongs to the UPF0254 family. (159 aa)    
Predicted Functional Partners:
hcgE
Hmd co-occurring protein HcgE.
     
 0.972
hcgC
Hmd co-occurring protein HcgC.
     
 0.938
hcgB
Hmd co-occurring protein HcgB.
     
 0.898
hcgA
Hmd co-occurring protein HcgA.
     
 0.863
ADL59109.1
Conserved hypothetical protein.
       0.815
hmd
H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT.
     
 0.767
hcgG
Hmd co-occurring protein HcgG.
     
 0.723
hmdII
H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase II.
      
 0.668
hycI
Hydrogenase maturation protease.
      
 0.557
hypF
Predicted hydrogenase maturation factor HypF.
      
 0.557
Your Current Organism:
Methanothermobacter marburgensis
NCBI taxonomy Id: 79929
Other names: M. marburgensis str. Marburg, Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133), Methanobacterium thermoautotrophicum str. Marburg, Methanothermobacter marburgensis str. Marburg, Methanothermobacter marburgensis strain Marburg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.