STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ehbQEnergy-converting hydrogenase B, subunit Q. (218 aa)    
Predicted Functional Partners:
ehbP
Energy-converting hydrogenase B, subunit P.
     
 0.920
ehbO
Energy-converting hydrogenase B, subunit O.
       0.819
ehbA
Energy-converting hydrogenase B, subunit A.
     
 0.780
ehbN
Energy-converting hydrogenase B, subunit N.
     
 0.778
ehbM
Energy-converting hydrogenase B, subunit M.
       0.772
ehbL
Energy-converting hydrogenase B, subunit L.
       0.765
htpX
Predicted heat shock protein; Belongs to the peptidase M48B family.
  
    0.762
ehbK
Energy-converting hydrogenase B, subunit K.
       0.739
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
 
    0.709
hemD
uroporphyrinogen-III synthase.
  
    0.686
Your Current Organism:
Methanothermobacter marburgensis
NCBI taxonomy Id: 79929
Other names: M. marburgensis str. Marburg, Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133), Methanobacterium thermoautotrophicum str. Marburg, Methanothermobacter marburgensis str. Marburg, Methanothermobacter marburgensis strain Marburg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.