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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL59284.1Predicted methyltransferase. (228 aa)    
Predicted Functional Partners:
ksgA
Predicted dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.
 
   
 0.909
prf
Peptide chain release factor eRF, subunit 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA.
   
 0.905
ahaK
A1AO ATPase, subunit K; Belongs to the V-ATPase proteolipid subunit family.
  
   0.854
ADL59282.1
Conserved hypothetical protein.
       0.795
ADL59283.1
Predicted transcriptional regulator.
       0.795
ADL59280.1
Predicted RNA-binding protein.
 
     0.745
rpl21E
50S ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.
 
   
 0.708
ADL57878.1
Sua5-related protein.
  
  
 0.685
ADL59279.1
Predicted DNA-directed RNA polymerase, subunit F.
       0.659
ADL58714.1
Predicted DNA modification methylase.
  
  
 0.635
Your Current Organism:
Methanothermobacter marburgensis
NCBI taxonomy Id: 79929
Other names: M. marburgensis str. Marburg, Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133), Methanobacterium thermoautotrophicum str. Marburg, Methanothermobacter marburgensis str. Marburg, Methanothermobacter marburgensis strain Marburg
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