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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103036701Endothelial PAS domain protein 1a. (816 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog b; Belongs to the SKP1 family.
    
 0.832
W5LL98_ASTMX
Aryl-hydrocarbon receptor nuclear translocator 2.
   
0.827
LOC103047410
Aryl hydrocarbon receptor nuclear translocator.
   
0.827
hif1an
Hypoxia inducible factor 1 subunit alpha inhibitor.
    
 0.827
LOC103026553
Von Hippel-Lindau tumor suppressor.
    
 0.802
LOC103029880
Von Hippel-Lindau tumor suppressor like.
    
 0.802
Crebbp
CREB binding protein a.
    
 0.796
egln3
Egl-9 family hypoxia-inducible factor 3.
    
 0.794
ENSAMXP00000028069
Egl-9 family hypoxia-inducible factor 1a.
    
 0.794
LOC103047661
Egl-9 family hypoxia-inducible factor 2.
    
 0.794
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.