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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cttnbp2nlCTTNBP2 N-terminal like b. (595 aa)    
Predicted Functional Partners:
pdcd10
Programmed cell death 10b.
    
 
 0.807
LOC103036474
Programmed cell death 10a.
    
 
 0.807
LOC103040199
Uncharacterized protein.
    
 
 0.799
LOC103042482
MOB family member 4, phocein.
    
 
 0.799
Strip1
Striatin interacting protein 1.
    
 
 0.764
ENSAMXP00000052465
Striatin interacting protein 2.
    
 
 0.764
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
    
   0.760
cct2
Chaperonin containing TCP1, subunit 2 (beta).
    
   0.760
tcp1
T-complex 1.
    
   0.758
strn4
Striatin, calmodulin binding protein 4.
   
 
 0.691
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.