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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5K0Q2_ASTMXDelta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (726 aa)    
Predicted Functional Partners:
LOC103034623
Notch receptor 1a.
   
0.774
LOC103025197
Notch receptor 1b.
   
0.774
Mib1
Mindbomb E3 ubiquitin protein ligase 1.
   
 0.590
LOC103042072
Notch receptor 3.
    
0.565
Neurog1
Neurogenin 1.
   
  
 0.529
rbpj
Recombination signal binding protein for immunoglobulin kappa J region b.
    
 0.510
LOC103029567
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.510
ENSAMXP00000038196
Ankyrin repeat and SOCS box containing 11.
   
 0.473
Eys
Uncharacterized protein.
    
0.465
ENSAMXP00000031417
Uncharacterized protein.
    
0.465
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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