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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5K0Q6_ASTMXSynapsin IIa. (451 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.776
RIMS2-2
Regulating synaptic membrane exocytosis 2.
   
 
 0.776
W5L1R1_ASTMX
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.688
Cask
Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.
   
 0.688
syt1
Synaptotagmin Ia.
   
 0.668
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.629
LOC103032718
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.629
W5KSW2_ASTMX
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.593
LOC103041159
Growth associated protein 43.
   
  
 0.580
W5JZI3_ASTMX
C2 domain-containing protein.
   
 0.579
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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