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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppil2Peptidylprolyl isomerase (cyclophilin)-like 2. (526 aa)    
Predicted Functional Partners:
Cwc22
CWC22 spliceosome associated protein homolog.
   
 0.971
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
   
 0.952
syf2
SYF2 pre-mRNA-splicing factor.
    
 0.945
Srrm1
PWI domain-containing protein.
   
 0.941
mtrex
Mtr4 exosome RNA helicase.
   
 0.937
ppwd1
Peptidylprolyl isomerase domain and WD repeat containing 1.
  
0.935
ccdc12
Coiled-coil domain containing 12.
   
 0.934
Ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 
 
0.928
Ppil3
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
  
0.925
Srrt
Serrate RNA effector molecule homolog (Arabidopsis).
   
 
  0.925
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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