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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5K1A9_ASTMXADAM metallopeptidase with thrombospondin type 1 motif, 13. (1370 aa)    
Predicted Functional Partners:
vwf
Von Willebrand factor.
    
 0.621
pofut2
Protein O-fucosyltransferase 2.
     
 0.616
LOC103043379
LRRCT domain-containing protein.
      
 0.578
ENSAMXP00000033497
Complement factor H like 4.
     
 0.533
W5KLB0_ASTMX
Beta 3-glucosyltransferase b.
    
 0.495
b3glct
Beta 3-glucosyltransferase a.
    
 0.495
Dgke
Diacylglycerol kinase.
      
 0.474
W5LD04_ASTMX
Uncharacterized protein.
     
 0.443
W5K8Z0_ASTMX
Coagulation factor VIII, procoagulant component; Belongs to the multicopper oxidase family.
    
 
 0.439
LOC103032429
Coagulation factor V; Belongs to the multicopper oxidase family.
    
 
 0.439
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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