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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5K1E1_ASTMXUbiquitin-like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family. (1031 aa)    
Predicted Functional Partners:
LOC103044311
Ubiquitin-conjugating enzyme E2 variant 1.
   
 
 0.965
UBB
Ubiquitin B.
   
 0.931
ube2n
Ubiquitin-conjugating enzyme E2Na; Belongs to the ubiquitin-conjugating enzyme family.
  
 0.922
rps27a
Ribosomal protein S27a.
   
 0.916
uba1
Ubiquitin-like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
  
  
 
0.909
UBA6
Ubiquitin like modifier activating enzyme 6.
  
  
 
0.908
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.901
ube2g2
Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
    
 0.871
ube2c
Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.863
ube2r2
Ubiquitin-conjugating enzyme E2R 2; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.846
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.