close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5K1R5_ASTMXTransducin beta like 1 X-linked. (456 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.943
LOC103034575
Catenin, beta 2.
   
 0.940
Tbl1xr1
Transducin (beta)-like 1 X-linked receptor 1a.
  
  
 
0.940
LOC103032574
Transducin (beta)-like 1 X-linked receptor 1b.
  
  
 
0.940
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.940
apc2
APC regulator of WNT signaling pathway 2.
    
  0.900
Apc
APC regulator of WNT signaling pathway.
    
  0.900
W5LKA6_ASTMX
Nuclear receptor corepressor 1.
   
 0.844
Ncor2
Nuclear receptor corepressor 2.
   
 0.844
HDAC3
Histone deacetylase 3.
   
 0.802
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.