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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UPRTUracil phosphoribosyltransferase homolog. (240 aa)    
Predicted Functional Partners:
amdhd1
Amidohydrolase domain containing 1.
  
 
 0.828
ENSAMXP00000048002
Guanine deaminase.
  
 
 0.828
uck1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
  
 0.823
W5KQS3_ASTMX
Thymidine phosphorylase.
  
 
 0.818
W5KDC8_ASTMX
Programmed cell death 11.
   
 
 0.812
Shmt1
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
  
 0.804
shmt2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
  
 0.804
gmps
Guanine monophosphate synthase.
  
  
 0.793
W5LI77_ASTMX
Uridine-cytidine kinase; Belongs to the uridine kinase family.
  
 0.792
gart
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
  
 0.789
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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