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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5K1Z5_ASTMXSyntrophin, beta 2. (489 aa)    
Predicted Functional Partners:
W5K2D4_ASTMX
Dystrobrevin.
    
 
 0.649
W5KA34_ASTMX
Dystrobrevin.
    
 
 0.649
ENSAMXP00000047741
Dystrobrevin.
    
 
 0.649
LOC103035680
Si:dkey-34e4.1.
    
 
 0.580
C13h1orf226
Nitric oxide synthase 1 (neuronal) adaptor protein a.
    
 
 0.580
LOC103026217
Nitric oxide synthase 1 (neuronal) adaptor protein b.
    
 
 0.580
W5JYZ3_ASTMX
Uncharacterized protein.
    
 
 0.560
W5K083_ASTMX
Utrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.
    
 
 0.560
Dmd
Dystrophin.
    
 
 0.454
W5JXQ6_ASTMX
Uncharacterized protein.
    
 
 0.454
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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