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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem214Transmembrane protein 214. (630 aa)    
Predicted Functional Partners:
sec63
SEC63 homolog, protein translocation regulator.
   
 
 0.721
Ckap4
Uncharacterized protein.
    
 
 0.583
tmem70
Transmembrane protein 70.
      
 0.581
rhbdd1
Rhomboid domain containing 1.
      
 0.579
klhl31
Kelch-like family member 31.
      
 0.578
trmt11
tRNA methyltransferase 11 homolog.
      
 0.577
LOC111191288
Uncharacterized protein.
      
 0.577
exd2
Exonuclease 3'-5' domain containing 2.
      
 0.576
cnot2
CCR4-NOT transcription complex, subunit 2.
      
 0.575
Armc10
Armadillo repeat containing 10.
      
 0.571
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.