W5K288_ASTMX protein (Astyanax mexicanus) - STRING interaction network

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Score

W5K288_ASTMX

Nucleolin. (664 aa)

Predicted Functional Partners:

W5KSB7_ASTMX

0.885

LOC107197383

0.885

LOC103046444

0.885

eif3a

0.883

Fbl

0.831

nop58

0.830

Ncbp2

0.821

pan3

0.817

PAN2

0.811

Nop56

0.791

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Fbl	LOC103046444	ENSAMXP00000030387	ENSAMXP00000041726	Fibrillarin.	Nucleophosmin 1b.	0.502
Fbl	LOC107197383	ENSAMXP00000030387	ENSAMXP00000027348	Fibrillarin.	Nucleophosmin/nucleoplasmin, 2b.	0.502
Fbl	Nop56	ENSAMXP00000030387	ENSAMXP00000008255	Fibrillarin.	NOP56 ribonucleoprotein homolog.	0.999
Fbl	W5K288_ASTMX	ENSAMXP00000030387	ENSAMXP00000001698	Fibrillarin.	Nucleolin.	0.831
Fbl	W5KSB7_ASTMX	ENSAMXP00000030387	ENSAMXP00000010479	Fibrillarin.	Nucleophosmin 1a.	0.506
Fbl	eif3a	ENSAMXP00000030387	ENSAMXP00000005419	Fibrillarin.	Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.450
Fbl	nop58	ENSAMXP00000030387	ENSAMXP00000053409	Fibrillarin.	NOP58 ribonucleoprotein homolog (yeast).	0.999
LOC103046444	Fbl	ENSAMXP00000041726	ENSAMXP00000030387	Nucleophosmin 1b.	Fibrillarin.	0.502
LOC103046444	W5K288_ASTMX	ENSAMXP00000041726	ENSAMXP00000001698	Nucleophosmin 1b.	Nucleolin.	0.885
LOC103046444	nop58	ENSAMXP00000041726	ENSAMXP00000053409	Nucleophosmin 1b.	NOP58 ribonucleoprotein homolog (yeast).	0.638
LOC107197383	Fbl	ENSAMXP00000027348	ENSAMXP00000030387	Nucleophosmin/nucleoplasmin, 2b.	Fibrillarin.	0.502
LOC107197383	W5K288_ASTMX	ENSAMXP00000027348	ENSAMXP00000001698	Nucleophosmin/nucleoplasmin, 2b.	Nucleolin.	0.885
LOC107197383	nop58	ENSAMXP00000027348	ENSAMXP00000053409	Nucleophosmin/nucleoplasmin, 2b.	NOP58 ribonucleoprotein homolog (yeast).	0.638
Ncbp2	W5K288_ASTMX	ENSAMXP00000039041	ENSAMXP00000001698	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Nucleolin.	0.821
Nop56	Fbl	ENSAMXP00000008255	ENSAMXP00000030387	NOP56 ribonucleoprotein homolog.	Fibrillarin.	0.999
Nop56	W5K288_ASTMX	ENSAMXP00000008255	ENSAMXP00000001698	NOP56 ribonucleoprotein homolog.	Nucleolin.	0.791
Nop56	eif3a	ENSAMXP00000008255	ENSAMXP00000005419	NOP56 ribonucleoprotein homolog.	Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.568
Nop56	nop58	ENSAMXP00000008255	ENSAMXP00000053409	NOP56 ribonucleoprotein homolog.	NOP58 ribonucleoprotein homolog (yeast).	0.999
PAN2	W5K288_ASTMX	ENSAMXP00000005548	ENSAMXP00000001698	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...]	Nucleolin.	0.811
PAN2	pan3	ENSAMXP00000005548	ENSAMXP00000014780	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...]	PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...]	0.999