close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ofd1LisH domain-containing protein. (1017 aa)    
Predicted Functional Partners:
pcm1
Pericentriolar material 1.
   
 
 0.784
kif3a
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.700
Fopnl
Fgfr1op N-terminal like.
   
 
 0.674
ccdc14
Coiled-coil domain containing 14.
   
 
 0.652
Kiaa0753
Si:dkey-243i1.1.
    
 
 0.652
arl13b
ADP-ribosylation factor-like 13b.
   
 
 0.630
plk3
Serine/threonine-protein kinase PLK.
   
 0.626
LOC103027010
Serine/threonine-protein kinase PLK.
   
 0.626
plk1
Serine/threonine-protein kinase PLK.
   
 0.626
LOC103036971
Serine/threonine-protein kinase PLK.
   
 0.626
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.