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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103043282Si:ch73-21k16.5; Belongs to the GPAT/DAPAT family. (663 aa)    
Predicted Functional Partners:
LOC103032945
Glycerol-3-phosphate dehydrogenase [NAD(+)].
    
 0.957
LOC103034694
Glycerol-3-phosphate dehydrogenase [NAD(+)].
    
 0.957
gpd1
Glycerol-3-phosphate dehydrogenase [NAD(+)].
    
 0.957
gpd2
Glycerol-3-phosphate dehydrogenase 2 (mitochondrial).
    
 0.949
LOC111193896
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
  
 
 0.917
gnpat
Glyceronephosphate O-acyltransferase; Belongs to the GPAT/DAPAT family.
  
  
 
0.902
Agpat4
1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta).
  
 
 0.894
agpat3
1-acylglycerol-3-phosphate O-acyltransferase 3.
  
 
 0.894
agpat5
1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon).
  
 
 0.889
Lclat1
Lysocardiolipin acyltransferase 1.
  
 
 0.885
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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