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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rs1F5/8 type C domain-containing protein. (310 aa)    
Predicted Functional Partners:
slc40a1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.598
W5KBZ2_ASTMX
ATPase copper transporting beta.
  
 
 0.534
atp7a
ATPase copper transporting alpha.
  
 
 0.534
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 
 0.525
W5KZC0_ASTMX
Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization.
   
  
 0.520
pex10
Peroxisomal biogenesis factor 10.
    
 
 0.506
Pros1
Protein S.
   
 0.502
aasdh
Aminoadipate-semialdehyde dehydrogenase.
     
 0.491
sarm1
Sterile alpha and TIR motif containing 1.
    
 
 0.490
ENSAMXP00000038669
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.462
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.