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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5K2N2_ASTMXSi:dkey-21a6.5. (318 aa)    
Predicted Functional Partners:
W5K3M1_ASTMX
Tenascin N.
    
 0.645
tnr
Tenascin R (restrictin, janusin).
    
 0.645
W5KP24_ASTMX
Zmp:0000000846.
    
 0.645
W5KXC7_ASTMX
Tenascin C.
    
 0.645
ENSAMXP00000029221
Uncharacterized protein.
    
 0.645
ENSAMXP00000049247
Fibrinogen C-terminal domain-containing protein.
    
 0.645
ENSAMXP00000038912
Uncharacterized protein.
   
 0.553
ENSAMXP00000054481
Si:ch211-79k12.1.
   
 0.553
ripk4
Receptor-interacting serine-threonine kinase 4.
   
 0.544
W5L9N1_ASTMX
F-BAR domain-containing protein.
    
 0.532
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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