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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103022019Rho GTPase activating protein 35b. (1518 aa)    
Predicted Functional Partners:
LOC103031338
Ras homolog family member Cb.
    
 0.969
LOC103028705
Ras homolog gene family, member Aa.
    
 0.969
LOC103029431
Uncharacterized protein.
    
 0.969
LOC103035456
Ras homolog family member Ca.
    
 0.969
LOC103027457
Ras homolog gene family, member Ab.
    
 0.969
SRC
Tyrosine-protein kinase.
    
 0.930
LOC103038924
Tyrosine-protein kinase.
    
 0.930
ENSAMXP00000051608
Tyrosine-protein kinase.
    
 0.930
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
    
 0.906
arhgap5
Rho GTPase activating protein 5.
  
  
 
0.901
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.