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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5K2W7_ASTMXInositol 1,4,5-trisphosphate receptor, type 1a. (2631 aa)    
Predicted Functional Partners:
stim1
Stromal interaction molecule 1b.
    
 0.606
stim2
Stromal interaction molecule 2b.
    
 0.606
ENSAMXP00000030762
Stromal interaction molecule 1a.
    
 0.606
LOC103031161
Tromal interaction molecule 2a.
    
 0.606
W5K363_ASTMX
Zgc:158222; Belongs to the adenosylhomocysteinase family.
    
 0.584
ahcyl2
Adenosylhomocysteinase-like 2; Belongs to the adenosylhomocysteinase family.
    
 0.584
ahcyl1
Adenosylhomocysteinase-like 1; Belongs to the adenosylhomocysteinase family.
    
 0.584
LOC103024643
Lymphatic vessel endothelial hyaluronic receptor 1b.
    
 0.582
LOC103024317
Lymphatic vessel endothelial hyaluronic receptor 1a.
    
 0.582
mrvi1
Murine retrovirus integration site 1 homolog.
    
 0.582
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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