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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103022163Uncharacterized protein; Belongs to the peptidase C1 family. (334 aa)    
Predicted Functional Partners:
LOC103039548
BCL2 apoptosis regulator.
   
 
 0.659
birc2
Baculoviral IAP repeat containing 2.
     
 0.659
xiap
X-linked inhibitor of apoptosis.
     
 0.656
ENSAMXP00000031483
Baculoviral IAP repeat containing 5b.
     
 0.654
birc5
Baculoviral IAP repeat containing 5a.
     
 0.654
BIRC5
Baculoviral IAP repeat containing 5.
     
 0.654
Bcl2l1
BCL2 like 1.
     
 0.653
ctso
Cathepsin O; Belongs to the peptidase C1 family.
  
0.426
LOC103042155
Cathepsin F; Belongs to the peptidase C1 family.
  
0.421
W5LMA9_ASTMX
Cathepsin D; Belongs to the peptidase A1 family.
   
 0.416
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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