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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5K317_ASTMXUncharacterized protein. (678 aa)    
Predicted Functional Partners:
LOC103043088
Membrane protein, palmitoylated 5a (MAGUK p55 subfamily member 5); Belongs to the MAGUK family.
    
 0.683
mpp5
Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family.
    
 0.683
ENSAMXP00000038912
Uncharacterized protein.
   
  0.445
ENSAMXP00000054481
Si:ch211-79k12.1.
   
  0.445
Rbpjl
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.428
rbpj
Recombination signal binding protein for immunoglobulin kappa J region b.
    
 0.428
LOC103029567
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.428
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.415
W5K820_ASTMX
Translocase of outer mitochondrial membrane 20.
    
 0.415
W5LP30_ASTMX
Sidekick cell adhesion molecule 2a.
  
 
  0.414
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.