Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5K343_ASTMXUncharacterized protein. (324 aa)    
Predicted Functional Partners:
fgg
Fibrinogen gamma chain.
   
 0.695
ENSAMXP00000036158
Fibrinogen C-terminal domain-containing protein.
   
 0.636
LOC111194573
Uncharacterized protein.
   
 0.636
hgd
Homogentisate 1,2-dioxygenase.
   
    0.628
fgb
Fibrinogen beta chain.
   
 0.606
LOC103046808
Complement factor H like 1.
     
  0.603
Agxt2
Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
    0.528
tgm1
Transglutaminase 1 like 2.
    
 0.504
LOC103031113
Transglutaminase 2, C polypeptide A.
    
 0.504
LOC103032565
Transglutaminase 2, like.
    
 0.504
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
Server load: low (26%) [HD]