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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam185aFamily with sequence similarity 185 member A. (372 aa)    
Predicted Functional Partners:
pex13
Peroxisomal biogenesis factor 13.
   
 0.975
pex19
Peroxisomal biogenesis factor 19.
    
 0.974
Scp2
Sterol carrier protein 2a; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.953
ENSAMXP00000046481
Sterol carrier protein 2b.
    
 0.953
pex7
Peroxisomal biogenesis factor 7.
    
 0.953
eci2
Enoyl-CoA delta isomerase 2.
    
 0.949
W5K7W1_ASTMX
Hydroxysteroid dehydrogenase like 2.
    
 0.945
hsdl2
Hydroxysteroid dehydrogenase like 2.
    
 0.945
ephx2
Epoxide hydrolase 2, cytoplasmic.
   
 
  0.936
zfand4
Zinc finger, AN1-type domain 4.
    
 0.935
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.