Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
epg5Ectopic P-granules autophagy protein 5 homolog (C. elegans). (2553 aa)    
Predicted Functional Partners:
Gabarapl2
GABA(A) receptor-associated protein like 2.
    
 0.967
Map1lc3b
Microtubule-associated protein 1 light chain 3 beta.
    
 0.964
map1lc3a
Microtubule-associated protein 1 light chain 3 alpha.
    
 0.964
LOC103035726
Microtubule-associated protein 1 light chain 3 gamma, like.
    
 0.957
LOC103027931
Zgc:92606.
    
 0.957
map1lc3c
Microtubule-associated protein 1 light chain 3 gamma.
    
 0.957
LOC103042533
Si:dkey-13a21.4.
     
  0.945
LOC103044705
Uncharacterized protein.
    
 0.929
LOC103039768
GABA(A) receptor-associated protein b.
    
 0.929
LOC103037223
RAB7b, member RAS oncogene family.
     
 0.927
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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