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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5K4G3_ASTMXUncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (1233 aa)    
Predicted Functional Partners:
pkp2
Plakophilin 2.
   
 0.780
LOC103045821
Junction plakoglobin a.
    
 0.779
LOC103034091
Desmocollin 2 like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
0.721
W5KDJ8_ASTMX
Junction plakoglobin b.
    
 0.656
Pkp1
Plakophilin 1b.
   
 0.652
LOC103025382
Plakophilin 3b.
   
 0.606
LOC103046265
Plakophilin 3a.
   
 0.606
perp
P53 apoptosis effector related to pmp22.
   
 
 0.533
LOC103034575
Catenin, beta 2.
    
 0.508
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.508
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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