close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ngrnNeugrin, neurite outgrowth associated. (317 aa)    
Predicted Functional Partners:
fastkd2
RAP domain-containing protein.
    
 
 0.805
trub2
TruB pseudouridine (psi) synthase family member 2.
    
 
 0.701
LOC103024327
RNA pseudouridine synthase D4.
    
 
 0.682
ddx28
DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.
    
 
 0.589
Gtpbp10
GTP-binding protein 10 (putative).
   
  
 0.586
actr8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
   
    0.570
LOC103041319
Pentatricopeptide repeat domain 1.
    
 
 0.565
Rcc1l
RCC1 like.
    
 
 0.533
LOC103039857
Calcyon neuron-specific vesicular protein.
      
 0.518
smim4
Small integral membrane protein 4.
      
 0.446
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.