Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
W5K4X3_ASTMXC-type lectin domain containing 16A. (903 aa)    
Predicted Functional Partners:
rnf41
Ring finger protein 41.
    
 
 0.876
dexi
Dexi homolog (mouse).
      
 0.771
LOC103034698
Vacuolar protein sorting 26 homolog B, like.
    
 
 0.676
vps26b
VPS26, retromer complex component B.
    
 
 0.676
Usp8
Ubiquitin specific peptidase 8; Belongs to the peptidase C19 family.
      
 0.655
Wdr44
WD repeat domain 44.
      
 0.620
LOC103034714
RAB39B, member RAS oncogene family.
    
   0.620
LOC103039265
Zinc finger protein 280D.
      
 0.604
aqr
Aquarius intron-binding spliceosomal factor.
      
 0.599
ENSAMXP00000032410
SH2B adaptor protein 3.
      
 0.594
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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