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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pofut1Protein O-fucosyltransferase 1. (396 aa)    
Predicted Functional Partners:
pofut2
Protein O-fucosyltransferase 2.
     
0.965
poglut1
Protein O-glucosyltransferase 1.
   
 
 0.741
Eogt
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase.
      
 0.578
tbl2
Transducin (beta)-like 2.
   
    0.572
xxylt1
Xyloside xylosyltransferase 1.
      
 0.552
gmds
GDP-mannose 4,6-dehydratase.
      
 0.512
poglut2
Protein O-glucosyltransferase 2.
   
 
 0.468
poglut3
Protein O-glucosyltransferase 3.
   
 
 0.468
Pomgnt2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
      
 0.451
LOC103043605
Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.
      
 0.445
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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