Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pofut1Protein O-fucosyltransferase 1. (396 aa)    
Predicted Functional Partners:
pofut2
Protein O-fucosyltransferase 2.
   
 
 0.987
poglut1
Protein O-glucosyltransferase 1.
   
 
 0.909
LOC103034623
Notch receptor 1a.
    
 0.849
LOC103025197
Notch receptor 1b.
    
 0.849
slc35c1
Solute carrier family 35 member C1.
      
 0.714
tsr3
Probable ribosome biogenesis protein; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.713
ENSAMXP00000053081
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
      
 0.651
Eogt
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase.
      
 0.633
AKAP7
A-kinase anchoring protein 7.
      
 0.613
fut10
Alpha-(1,3)-fucosyltransferase; Probable fucosyltransferase; Belongs to the glycosyltransferase 10 family.
   
  
 0.610
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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