Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5K585_ASTMXUncharacterized protein. (298 aa)    
Predicted Functional Partners:
UQCRFS1
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
    
 0.553
UQCRFS1-2
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.553
ENSAMXP00000033031
UBX domain-containing protein 7.
    
   0.509
Lyrm4
Si:ch211-152c8.4; Belongs to the complex I LYR family.
   
 
 0.459
Mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.443
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.418
mrpl3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.414
mrpl43
Mitochondrial ribosomal protein L43.
   
   0.414
mrpl22
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.412
mrpl47
Mitochondrial ribosomal protein L47.
   
 
 0.409
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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