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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mab21l3Mab-21-like 3. (387 aa)    
Predicted Functional Partners:
gmnc
Geminin coiled-coil domain containing.
      
 0.692
LOC103038613
Thyroid hormone responsive.
    
  0.532
Rfx4
Regulatory factor X, 4.
      
 0.522
LOC103040935
Uroplakin 3b.
  
     0.459
themis
Thymocyte selection associated.
  
 
   0.442
LOC103042034
La ribonucleoprotein domain family, member 6b.
      
 0.424
larp6
La ribonucleoprotein domain family, member 6a.
      
 0.424
LOC103023834
HTH La-type RNA-binding domain-containing protein.
      
 0.424
upk1a
Tetraspanin.
  
     0.407
LOC103025996
Mab-21 domain-containing protein.
      
0.404
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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