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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5K5Q6_ASTMXDefensin, beta-like 2. (63 aa)    
Predicted Functional Partners:
W5K7T1_ASTMX
Si:dkey-165a24.9; Belongs to the G-protein coupled receptor 1 family.
  
     0.511
LOC111193040
UPAR/Ly6 domain-containing protein.
  
     0.491
LOC103022111
Actinodin3.
  
     0.475
LOC103041631
Ly6 domain containing, pigment cell.
  
     0.471
LOC103022817
Zgc:162331.
  
     0.469
LOC103021723
Si:ch211-242e8.1.
  
     0.464
LOC103030795
Actinodin2.
  
     0.445
LOC103029290
Prolactin 2.
  
     0.423
LOC103039622
Si:cabz01007802.1.
  
     0.402
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.