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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pwwp2bPWWP domain containing 2B. (582 aa)    
Predicted Functional Partners:
Tmem251
Transmembrane protein 251.
      
 0.674
LOC103040159
RNA binding motif protein 12B.
      
 0.561
LOC103036462
Ankyrin repeat and SOCS box-containing 12b.
      
 0.542
W5L385_ASTMX
Ring finger protein, LIM domain interacting.
      
 0.530
W5KVF8_ASTMX
Ankyrin repeat and SOCS box-containing 12a.
      
 0.518
LOC103021363
Serine/threonine-protein phosphatase with EF-hands.
      
 0.487
W5KYM2_ASTMX
G protein-coupled receptor 101; Belongs to the G-protein coupled receptor 1 family.
      
 0.445
taf5l
TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.
      
 0.437
taf5
TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
      
 0.437
W5KA50_ASTMX
Uncharacterized protein.
      
 0.426
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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