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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Higd2aHIG1 hypoxia inducible domain family, member 2A. (118 aa)    
Predicted Functional Partners:
LOC103045965
Cytochrome c oxidase assembly factor COX14.
   
  
 0.856
LOC103027379
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 
 0.853
W5KMV0_ASTMX
Uncharacterized protein.
   
 
 0.840
LOC103032313
Cytochrome c oxidase subunit 5B2.
   
 
 0.761
LOC103046374
Uncharacterized protein.
   
 
 0.761
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
   
    0.755
LOC103038114
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 
 0.695
LOC111193383
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 
 0.695
c3h1orf198
Si:ch73-111k22.2.
   
 
 0.683
romo1
Reactive oxygen species modulator 1.
   
  
 0.667
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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