Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5K6H7_ASTMXUncharacterized protein. (580 aa)    
Predicted Functional Partners:
ryk
Receptor like tyrosine kinase.
    
 0.609
wls
Wnt ligand secretion mediator.
    
 0.576
W5L464_ASTMX
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
      
 0.499
porcn
Porcupine O-acyltransferase like; Belongs to the membrane-bound acyltransferase family.
    
 0.479
fbxo3
F-box protein 3.
      
 0.473
ENSAMXP00000050193
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
    
 0.452
W5KJM9_ASTMX
Uncharacterized protein.
    
  0.424
dvl2
Dishevelled segment polarity protein 2.
    
 0.424
LOC103035729
Dishevelled segment polarity protein 1a.
    
 0.424
W5L3R0_ASTMX
Dishevelled segment polarity protein 3b.
    
 0.424
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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