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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clasp1Cytoplasmic linker associated protein 1a. (1580 aa)    
Predicted Functional Partners:
nudc
NudC nuclear distribution protein.
     
 0.672
bub3
BUB3 mitotic checkpoint protein.
    
 0.605
cdc20
Cell division cycle 20 homolog.
     
 0.599
LOC103030938
BUB1 mitotic checkpoint serine/threonine kinase Ba.
     
 0.517
Bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
     
 0.517
nudcd2
NudC domain containing 2.
     
 0.517
nudcd3
NudC domain containing 3.
     
 0.517
espl1
Extra spindle pole bodies like 1, separase.
     
 0.508
W5LET4_ASTMX
MAD2 mitotic arrest deficient-like 1 (yeast).
     
 0.492
Bora
Bora aurora kinase A activator.
     
 0.480
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.