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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acot8Acyl-CoA thioesterase 8. (344 aa)    
Predicted Functional Partners:
Scp2
Sterol carrier protein 2a; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.969
Cryl1
Crystallin, lambda 1.
    
 0.892
hadh
Hydroxyacyl-CoA dehydrogenase.
    
 0.892
pex10
Peroxisomal biogenesis factor 10.
     
 0.772
pex13
Peroxisomal biogenesis factor 13.
   
 
 0.769
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.757
tysnd1
Trypsin domain containing 1.
   
 
 0.754
ENSAMXP00000046481
Sterol carrier protein 2b.
  
 
 0.711
pex5l
Peroxisomal biogenesis factor 5-like a.
    
 0.692
pex5
Peroxisomal biogenesis factor 5.
    
 0.692
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.