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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5K6Q6_ASTMXSeizure related 6 homolog (mouse)-like 2. (856 aa)    
Predicted Functional Partners:
LOC103029426
Asp_Arg_Hydrox domain-containing protein.
 
 
  
 0.690
ENSAMXP00000053577
Uncharacterized protein.
    
 0.592
kif22
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.587
LOC103030809
Potassium channel tetramerization domain containing 13.
     
 0.583
LOC103036801
Double C2-like domains, alpha.
   
  
 0.581
LOC103026645
TLC domain containing 3Ba.
    
 
 0.580
W5KMJ8_ASTMX
Coronin; Belongs to the WD repeat coronin family.
  
 
 0.577
LOC103040367
Protein yippee-like; Belongs to the yippee family.
   
  
 0.575
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
    
 
 0.573
pagr1
PAXIP1 associated glutamate-rich protein 1.
      
 0.548
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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