close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103041666Solute carrier family 41 member 1. (545 aa)    
Predicted Functional Partners:
ENSAMXP00000053026
Transient receptor potential cation channel, subfamily M, member 6.
      
 0.568
trpm7
Transient receptor potential cation channel, subfamily M, member 7.
      
 0.534
dcakd
Dephospho-CoA kinase domain containing.
     
 0.418
slc13a1
Solute carrier family 13 member 1.
    
 
 0.414
slc13a4
Solute carrier family 13 member 4.
    
 
 0.414
LOC103025617
Cyclin and CBS domain divalent metal cation transport mediator 2b.
      
 0.408
ENSAMXP00000047620
Cyclin and CBS domain divalent metal cation transport mediator 4b.
      
 0.408
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.