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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5K7Z2_ASTMXZgc:158316. (505 aa)    
Predicted Functional Partners:
Ttc7a
Tetratricopeptide repeat domain 7A.
    
 
 0.637
ENSAMXP00000049812
Tetratricopeptide repeat domain 7B.
    
 
 0.637
cse1l
CSE1 chromosome segregation 1-like (yeast).
      
 0.575
kti12
KTI12 chromatin associated homolog.
      
 0.569
agfg1
ArfGAP with FG repeats 1b.
      
 0.567
W5L8B6_ASTMX
Phosphatidylinositol 4-kinase, catalytic, alpha b; Belongs to the PI3/PI4-kinase family.
    
 
 0.562
ENSAMXP00000039122
Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.
    
 
 0.562
ENSAMXP00000042908
Uncharacterized protein.
    
 
 0.562
LURAP1L
Leucine rich adaptor protein 1 like.
      
 0.531
LOC103035641
Mitogen-activated protein kinase.
      
 0.530
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.