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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc12a3Solute carrier family 12 member 3. (1018 aa)    
Predicted Functional Partners:
LOC103027865
Phosphate transporter; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport. Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.
     
 0.579
LOC103037779
Anion exchange protein.
     
 0.522
W5LEQ5_ASTMX
Solute carrier family 5 member 12; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
  
 0.456
slc22a13
Solute carrier family 22 member 13b.
   
 
 0.451
Cdh17
Cadherin 17, LI cadherin (liver-intestine).
   
  
 0.445
W5KB98_ASTMX
2-epi-5-epi-valiolone synthase.
  
 0.421
LOC103026991
Stereocilin 1.
    
 0.418
oxsr1
Oxidative stress responsive kinase 1b.
    
 
 0.415
stk39
Serine threonine kinase 39.
    
 
 0.415
W5KXH1_ASTMX
Solute carrier family 30 member 5.
     
 0.412
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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