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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kiaa0513Zgc:91860. (427 aa)    
Predicted Functional Partners:
gbe1
Glucan (1,4-alpha-), branching enzyme 1b.
  
 
 0.639
LOC103047293
Glucan (1,4-alpha-), branching enzyme 1a.
  
 
 0.639
pudp
Pseudouridine 5'-phosphatase.
  
 
 0.624
pgghg
Protein-glucosylgalactosylhydroxylysine glucosidase.
  
 
 0.611
klhl36
Kelch-like family member 36.
      
 0.610
yipf6
Protein YIPF.
  
 
 0.608
nol10
Nucleolar protein 10.
      
 0.601
aldh18a1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
  
 0.592
ints4
Integrator complex subunit 4.
    
 
 0.591
W5KY31_ASTMX
Uncharacterized protein.
   
 0.589
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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