close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap161Cilia and flagella associated protein 161. (309 aa)    
Predicted Functional Partners:
cfap52
Cilia and flagella associated protein 52.
   
 0.852
efhc2
EF-hand domain (C-terminal) containing 2.
   
 
 0.782
W5KF91_ASTMX
Meiosis-specific nuclear structural 1.
    
 0.727
cfap126
Cilia and flagella associated protein 126.
   
 
 0.722
c23h5orf49
Si:dkeyp-46h3.1.
   
 
 0.708
efhc1
EF-hand domain (C-terminal) containing 1.
   
 
 0.704
c6h9orf116
Si:ch211-248e11.2.
   
 
 0.696
cfap45
Cilia and flagella associated protein 45.
   
 
 0.676
LOC111193921
Enkurin domain-containing protein.
   
 
 0.644
LOC111191507
Enkurin, TRPC channel interacting protein.
   
 
 0.644
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.