close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
terb1Telomere repeat binding bouquet formation protein 1. (819 aa)    
Predicted Functional Partners:
terb2
Telomere repeat binding bouquet formation protein 2.
    
 
 0.951
terf1
Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat.
    
 
 0.931
MAJIN
Membrane anchored junction protein.
      
 0.888
W5KNM3_ASTMX
SUN domain-containing protein.
    
 
 0.596
setd2
SET domain containing 2, histone lysine methyltransferase.
      
 0.557
ENSAMXP00000029807
SUN domain-containing protein.
    
 
 0.547
FAM210B
Family with sequence similarity 210 member B.
      
 0.495
Terf2
Telomeric repeat binding factor a.
    
 
 0.494
ENSAMXP00000050923
Si:dkey-92f12.2.
    
 
 0.457
W5KAP3_ASTMX
SHOC2 leucine rich repeat scaffold protein.
   
    0.441
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.