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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103042343Smith-Magenis syndrome chromosome region, candidate 8b. (993 aa)    
Predicted Functional Partners:
c9orf72
Zgc:100846.
    
 0.986
wdr41
WD repeat domain 41.
    
 0.983
Tbk1
TANK-binding kinase 1.
   
 0.941
ulk1
Unc-51 like autophagy activating kinase 1.
    
 0.923
ulk2
Unc-51 like autophagy activating kinase 2.
    
 0.920
tank
TRAF family member-associated NFKB activator.
     
 0.919
smcr8
Smith-Magenis syndrome chromosome region, candidate 8a.
  
 
 
0.908
rab8a
RAB8A, member RAS oncogene family.
    
 0.830
LOC103034714
RAB39B, member RAS oncogene family.
    
 0.772
LOC103045353
Uncharacterized protein.
    
 0.717
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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