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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103032943Stearoyl-CoA desaturase (delta-9-desaturase); Belongs to the fatty acid desaturase type 1 family. (342 aa)    
Predicted Functional Partners:
LOC103022768
Stearoyl-CoA desaturase b; Belongs to the fatty acid desaturase type 1 family.
  
  
 
0.901
ENSAMXP00000035581
Cytochrome b5 reductase 4.
   
 
 0.601
W5KHJ7_ASTMX
Acetyl-CoA carboxylase beta.
   
  
 0.550
ENSAMXP00000037227
Biotin carboxylation domain-containing protein.
   
  
 0.550
LOC103045045
Si:dkey-61p9.11.
   
 
 0.519
LOC103045349
Carrier domain-containing protein.
   
 
 0.519
fasn
Coiled-coil domain containing 57.
   
 
 0.519
ENSAMXP00000033334
Carrier domain-containing protein.
   
 
 0.519
fads2
Fatty acid desaturase 2.
  
 
 0.504
LOC103042817
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
   
  
 0.485
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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