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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KAP2_ASTMXProstaglandin E synthase 3a (cytosolic). (207 aa)    
Predicted Functional Partners:
LOC103024139
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.951
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.951
ptges
Prostaglandin E synthase.
     
 0.951
stip1
Stress-induced phosphoprotein 1.
   
 0.950
ppp5c
Serine/threonine-protein phosphatase.
    
 0.943
ptgs1
Prostaglandin-endoperoxide synthase 1.
     
 0.928
LOC103044320
Carbonyl reductase 1-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.923
cbr1
Carbonyl reductase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.923
LOC103044035
Carbonyl reductase 1-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.923
PTGIS
Prostaglandin I2 synthase; Belongs to the cytochrome P450 family.
     
 0.922
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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