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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KBH1_ASTMXPericentrin. (4101 aa)    
Predicted Functional Partners:
LOC103028784
Potassium voltage-gated channel, KQT-like subfamily, member 1.2; Belongs to the potassium channel family.
    
 0.690
kcnq1
Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family.
    
 0.690
plk1
Serine/threonine-protein kinase PLK.
   
 0.687
LOC103028142
Centrin, EF-hand protein, 2.
    
 0.675
LOC103037928
Centrin 4.
    
 0.641
ift88
Intraflagellar transport 88 homolog.
    
 0.640
LOC103042947
Tubulin, gamma 1; Belongs to the tubulin family.
    
 0.613
arl13b
ADP-ribosylation factor-like 13b.
    
 0.598
pcm1
Pericentriolar material 1.
   
 0.592
plk3
Serine/threonine-protein kinase PLK.
   
 0.588
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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