LOC103025553 protein (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC103025553

Dimethylaniline monooxygenase [N-oxide-forming]. (562 aa)

Predicted Functional Partners:

LOC103024186

0.902

LOC103037918

0.592

cdca8

0.557

atp5pb

0.556

atp5f1a

0.545

atp5f1b

0.523

atp5f1c

0.517

coq3

0.510

aldh16a1

0.506

kmo

0.480

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103024186	LOC103025553	ENSAMXP00000005171	ENSAMXP00000005172	Dimethylaniline monooxygenase [N-oxide-forming].	Dimethylaniline monooxygenase [N-oxide-forming].	0.902
LOC103024186	LOC103037918	ENSAMXP00000005171	ENSAMXP00000027368	Dimethylaniline monooxygenase [N-oxide-forming].	Zgc:63568.	0.469
LOC103024186	aldh16a1	ENSAMXP00000005171	ENSAMXP00000011320	Dimethylaniline monooxygenase [N-oxide-forming].	Aldehyde dehydrogenase 16 family, member A1.	0.408
LOC103024186	atp5f1a	ENSAMXP00000005171	ENSAMXP00000015095	Dimethylaniline monooxygenase [N-oxide-forming].	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.545
LOC103024186	atp5f1b	ENSAMXP00000005171	ENSAMXP00000019252	Dimethylaniline monooxygenase [N-oxide-forming].	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.523
LOC103024186	atp5f1c	ENSAMXP00000005171	ENSAMXP00000029698	Dimethylaniline monooxygenase [N-oxide-forming].	ATP synthase subunit gamma.	0.517
LOC103024186	atp5pb	ENSAMXP00000005171	ENSAMXP00000038945	Dimethylaniline monooxygenase [N-oxide-forming].	ATP synthase peripheral stalk-membrane subunit b.	0.556
LOC103024186	cdca8	ENSAMXP00000005171	ENSAMXP00000030025	Dimethylaniline monooxygenase [N-oxide-forming].	Cell division cycle associated 8.	0.557
LOC103024186	coq3	ENSAMXP00000005171	ENSAMXP00000008882	Dimethylaniline monooxygenase [N-oxide-forming].	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.510
LOC103024186	kmo	ENSAMXP00000005171	ENSAMXP00000047881	Dimethylaniline monooxygenase [N-oxide-forming].	Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid.	0.480
LOC103025553	LOC103024186	ENSAMXP00000005172	ENSAMXP00000005171	Dimethylaniline monooxygenase [N-oxide-forming].	Dimethylaniline monooxygenase [N-oxide-forming].	0.902
LOC103025553	LOC103037918	ENSAMXP00000005172	ENSAMXP00000027368	Dimethylaniline monooxygenase [N-oxide-forming].	Zgc:63568.	0.592
LOC103025553	aldh16a1	ENSAMXP00000005172	ENSAMXP00000011320	Dimethylaniline monooxygenase [N-oxide-forming].	Aldehyde dehydrogenase 16 family, member A1.	0.506
LOC103025553	atp5f1a	ENSAMXP00000005172	ENSAMXP00000015095	Dimethylaniline monooxygenase [N-oxide-forming].	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.545
LOC103025553	atp5f1b	ENSAMXP00000005172	ENSAMXP00000019252	Dimethylaniline monooxygenase [N-oxide-forming].	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.523
LOC103025553	atp5f1c	ENSAMXP00000005172	ENSAMXP00000029698	Dimethylaniline monooxygenase [N-oxide-forming].	ATP synthase subunit gamma.	0.517
LOC103025553	atp5pb	ENSAMXP00000005172	ENSAMXP00000038945	Dimethylaniline monooxygenase [N-oxide-forming].	ATP synthase peripheral stalk-membrane subunit b.	0.556
LOC103025553	cdca8	ENSAMXP00000005172	ENSAMXP00000030025	Dimethylaniline monooxygenase [N-oxide-forming].	Cell division cycle associated 8.	0.557
LOC103025553	coq3	ENSAMXP00000005172	ENSAMXP00000008882	Dimethylaniline monooxygenase [N-oxide-forming].	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.510
LOC103025553	kmo	ENSAMXP00000005172	ENSAMXP00000047881	Dimethylaniline monooxygenase [N-oxide-forming].	Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid.	0.480